So while installing the seal it popped in a bit too deep. Prying it back would off course damage it, so I left it like it is. According to everything I read it should be flush with the housing, but it's like 2 mm too deep. Here's some pictures:
This is on a honda D17 engine. It seems the seal housing has a little lip that makes it impossible to drive the seal in way too deep and block an oil passage or something:
You guys reckon this will be allright or should I redo it with a new seal? The crank surface itself was mint all the way down so the new position the seal is sitting on should be good.